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Page 51
allied
academies
Journal of Biotechnology and Phytochemistry| Volume: 2
October 25-26, 2018 | Frankfurt, Germany
Joint Event
Biotechnology & Medical Microbiology
World Congress on
3
rd
International Conference on
Food Science & Technology
Annotation of the
kytococcus sedentarius
genome from DNA coordinates 1060198 to 1066421
Aparna Viswanathan
University of Buffalo, USA
K
ytococcus sedentarius
is a gram-positive, free-living,
non-motile and strictly aerobic organism. It is originally
isolated from marine environment and occurs in tetrads.
Kytococcus sedentarius
belongs to a poorly studied family
of Dermacoccaceae and has a high GC content of 72%.
Studying about
Kytococcus sedentarius
is important as it is an
opportunistic pathogen causing pitted keratolysis, endocarditis
and hemorrhagic pneumonia.
Kytococcus sedentarius
also
produces antibiotics known as oligoketides(Sims et al., 2009).
Ksed_RS13525, Ksed_RS13530, Ksed_RS05075, Ksed_RS05080,
Ksed_RS05085, Ksed_RS05090, Ksed_RS05095.GENI-ACT was
used to annotate the sequences. Basic information module,
sequence based similarity data, structure based similarity,
cellular localization data, alternate open reading frame,
enzymatic function, duplication and degradation, horizontal
gene transfer, RNA.Three of the given genes (
Kytococcus
sedentarius
_RS13525, Ksed_RS13530, Ksed_RS05090) were
annotated by the computer as hypothetical proteins and
require further research. The rest of the four genes appeared to
be correctly annotated in the computer database.
Kytococcus
sedentarius
_RS05095 has a strong evidence of horizontal gene
transfer.
e:
aparnavi@buffalo.edu