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CANCER STEM CELLS AND
ONCOLOGY RESEARCH
11
th
International Conference on
Journal of Medical Oncology and Therapeutics
|
Volume 3
Jiangwen Zhang et al., J Med Oncl Ther 2018, Volume 3
INTEGRATED ANALYSES IDENTIFY
A POOR-PROGNOSIS SUBTYPE OF
HEPATOCELLULAR CARCINOMA
REGULATED BY A CORE microRNA
REGULATORY CIRCUITRY
Jiangwen Zhang, Qingzheng Kang, Yin Tong, Jianlong Sun
and
Xin-Yuan Guan
The University of Hong Kong, China
C
ancer stem cells (CSCs) cause tumor heterogeneity, relapse, and
resistance to therapy. The underpinnings of CSCs remain to be
elucidated, especially the underlying gene regulatory network. We here
conducted integrated analyses and identified a miRNA-regulatory
network defining a stemness subtype with poor-prognosis from TCGA
hepatocellular carcinoma (HCC) cohort with independent validations. The
poor-prognosis subtype was characterized by the signature expression
pattern of CSCs orchestrated by two miRNAs and their mRNA targets
that formed a core regulatory circuitry (CRC). Within the CRC, miR483-
3p bound a complementary sequence on
SOX9
promoter, facilitating the
recruitment of RNA polymerase II and STAT3, which was essential for
SOX9
transcription activation. SOX9 can further activate
SOX4
expression.
Both
SOX4
and its associated activator lncSOX4 were the direct targets
of miR204-5p.
SOX4
and miR204-5p formed double-negative feedback
loop through mutual inhibition. The expression level of miR204-5p was
tightly modulated by miR483-3p, whose promoter was significantly de-
methylated in the stemness subtype. Activation of the CRC essential
for the self-renewal and maintenance of liver CSCs culminated in
downregulation of miR204-5p and upregulation of miR483-3p,
SOX9
,
and
SOX4
. Functional significance of the CRC for HCC metastasis and
drug resistance was further demonstrated with various
in vitro
and
in vivo
assays.
Jiangwen Zhang graduated from Johns Hop-
kins University with PhD He has worked at
Harvard University Genome Center as Senior
System Biologist for years before joining Uni-
versity of Hong Kong in 2013. His lab has broad
interest in genetic and epigenetic regulation in
development and diseases. Currently, his lab is
focusing on epigenetic regulation of tumorigen-
esis. His lab employs high through-put ‘omics’
assays and large scale computation to dissect
the gene regulatory network and signaling path-
ways involved in oncogenesis.
jzhang1@hku.hkBIOGRAPHY