Journal of Agricultural Science and Botany

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Mini Review - Journal of Agricultural Science and Botany (2024) Volume 8, Issue 4

Exploring the role of non-coding RNAS in plant development and stress adaptation

Chittaranjan Kole *

Department of Plant Genetics, ICAR-National Institute of Plant Biotechnology, India

*Corresponding Author:
Chittaranjan Kole
Department of Plant Genetics, ICAR-National Institute of Plant Biotechnology, India
E-mail: kole.cr@icar.gov.in

Received: 25-Jul-2024, Manuscript No. AAASCB-24-144056; Editor assigned: 27-Jul-2024, PreQC No. AAASCB-24-144056; Reviewed:10-Aug-2024, QC No. AAASCB-24-144056; Revised:16-Aug-2024, Manuscript No. AAASCB-24-144056; Published:22-Aug-2024, DOI:10.35841/ aaascb-8.4.248

Citation: Kole C. Exploring the role of non-coding RNAS in plant development and stress adaptation. J Agric Sci Bot. 2023; 8(4):248

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Introduction

Non-coding RNAs (ncRNAs) have emerged as key regulators in the complex network of gene expression, playing crucial roles in plant development and stress adaptation. Unlike coding RNAs, which are translated into proteins, ncRNAs function without encoding proteins, influencing a wide range of physiological and developmental processes in plants. The discovery of ncRNAs has opened up new avenues for understanding the intricate mechanisms that govern plant growth, development, and responses to environmental stresses [1].

The initial focus of molecular biology was on protein-coding genes, which were believed to be the primary determinants of cellular function and organismal development. However, the advent of high-throughput sequencing technologies and advanced bioinformatics tools has revealed that a significant portion of the plant genome is transcribed into ncRNAs, highlighting the importance of these molecules in gene regulation. This realization has fundamentally changed our understanding of the genome’s regulatory landscape, emphasizing that ncRNAs are not mere transcriptional noise but essential players in plant biology [2].

Among the various classes of ncRNAs, microRNAs (miRNAs) and small interfering RNAs (siRNAs) have been extensively studied for their roles in post-transcriptional gene regulation. These small RNAs function by binding to complementary sequences in messenger RNAs (mRNAs), leading to their degradation or the inhibition of their translation. This targeted gene silencing mechanism is crucial for fine-tuning gene expression during plant development and in response to environmental cues, such as drought, salinity, and pathogen attack [3].

Long non-coding RNAs (lncRNAs) represent another class of ncRNAs that are gaining attention for their diverse regulatory functions in plants. Unlike miRNAs and siRNAs, lncRNAs are typically longer than 200 nucleotides and are involved in a wide range of regulatory processes, including chromatin remodeling, transcriptional control, and post-transcriptional modification. The functional diversity of lncRNAs makes them important contributors to the regulation of plant growth, development, and stress responses, although their mechanisms of action are still not fully understood [4].

The role of ncRNAs in plant development is multifaceted, influencing processes such as embryogenesis, root and shoot development, flowering, and reproductive organ formation. For example, specific miRNAs are known to regulate the expression of key developmental genes, ensuring that these genes are activated or repressed at the right time and in the right tissues. This precise control of gene expression is essential for proper plant development, and disruptions in ncRNA function can lead to developmental abnormalities or reduced fitness [5].

In addition to their roles in development, ncRNAs are also critical for plant adaptation to environmental stresses, acting as molecular switches that help plants respond to changing conditions. Under stress conditions, such as drought, cold, or pathogen infection, the expression of certain ncRNAs is modulated, leading to the activation of stress-responsive genes. These ncRNAs help plants to reprogram their gene expression profiles, enabling them to cope with adverse environmental conditions and maintain growth and survival [6].

The involvement of ncRNAs in stress adaptation is not limited to immediate responses; they also play a role in priming plants for future stress encounters. This phenomenon, known as stress memory, allows plants to "remember" previous stress exposures and respond more effectively to subsequent challenges. ncRNAs are believed to contribute to the establishment and maintenance of stress memory by modulating gene expression in a way that prepares the plant for future stressors, although the exact mechanisms remain a topic of ongoing research [7].

Recent studies have also highlighted the potential of ncRNAs as targets for crop improvement strategies, particularly in enhancing stress tolerance and improving yield under suboptimal conditions. By manipulating the expression of specific ncRNAs, it may be possible to engineer plants that are better equipped to withstand environmental stresses, thereby contributing to agricultural sustainability and food security. This approach offers a promising avenue for developing crops that can thrive in increasingly unpredictable and challenging environments [8].

The study of ncRNAs in plants is still a relatively young field, and many questions remain about their full range of functions and mechanisms of action. Understanding how ncRNAs interact with other components of the gene regulatory network, including proteins, DNA, and other RNAs, is crucial for unraveling their roles in plant biology. Additionally, the identification and characterization of novel ncRNAs will be important for expanding our knowledge of the regulatory processes that underlie plant development and stress adaptation [9].

Despite the progress made in ncRNA research, significant challenges remain, particularly in the functional annotation of ncRNAs and the elucidation of their precise roles in gene regulation. The sheer number of ncRNAs and their diverse modes of action make this a complex task, requiring the integration of various experimental and computational approaches. Furthermore, the context-dependent nature of ncRNA function, where their roles may vary depending on the developmental stage, tissue type, or environmental conditions, adds another layer of complexity to this research [10].

conclusion

The exploration of non-coding RNAs in plant development and stress adaptation represents a rapidly evolving field with profound implications for both basic plant biology and agricultural applications. As our understanding of ncRNAs continues to grow, these molecules are likely to become increasingly important targets for crop improvement and stress management strategies. By uncovering the roles of ncRNAs in plant biology, researchers can develop new tools and techniques to enhance crop resilience, productivity, and sustainability in the face of global environmental challenges

References

  1. Alvey L, Harberd NP. (2005).DELLA proteins: integrators of multiple plant growth regulatory inputs?. Physiol Plant. 123(2):153-60.
  2. Indexed atGoogle ScholarCross Ref

  3. Depuydt S, Hardtke CS. (2011). Hormone signalling crosstalk in plant growth regulation. Current biology. 21(9):R365-73.
  4. Indexed atGoogle ScholarCross Ref

  5. Egamberdieva D. (2009). Alleviation of salt stress by plant growth regulators and IAA producing bacteria in wheat.Acta Physiol Plant. 31(4):861-4.
  6. Indexed atGoogle ScholarCross Ref

  7. Guo B, Abbasi BH, Zeb A, Xu LL, Wei YH. (2011). Thidiazuron: a multi-dimensional plant growth regulator. Afr J Biotechnol. 10(45):8984-9000.
  8. Indexed atGoogle ScholarCross Ref

  9. Gupta V, Kumar M, Brahmbhatt H, Reddy CR, Seth A, et al., (2011).  Simultaneous determination of different endogenetic plant growth regulators in common green seaweeds using dispersive liquid–liquid microextraction method.Plant Physiol Biochem. 49(11):1259-63.
  10. Indexed atGoogle ScholarCross Ref

  11. Javid MG, Sorooshzadeh A, Moradi F, Modarres Sanavy SA, Allahdadi I. (2011). The role of phytohormones in alleviating salt stress in crop plants.Aust J Crop Sci. 5(6):726-34.
  12. Indexed atGoogle Scholar

  13. Panda D, Pramanik K, Nayak BR. (2012). Use of sea weed extracts as plant growth regulators for sustainable agriculture. Int j bio-resour stress manag. 3(3):404-11.
  14. Google Scholar

  15. Santner A, Calderon-Villalobos LI, Estelle M. (2009). Plant hormones are versatile chemical regulators of plant growth.Nat Chem Biol. 5(5):301-7.
  16. Indexed atGoogle ScholarCross Ref

  17. Schäfer M, Brütting C, Meza-Canales ID, Großkinsky DK, Vankova R, et al., (2015).  The role of cis-zeatin-type cytokinins in plant growth regulation and mediating responses to environmental interactions.J Exp Bot. 66(16):4873-84.
  18. Indexed atGoogle ScholarCross Ref

  19. Tassi E, Pouget J, Petruzzelli G, Barbafieri M. (2008). The effects of exogenous plant growth regulators in the phytoextraction of heavy metals. Chemosphere. 71(1):66-73.
  20. Indexed atGoogle ScholarCross Ref

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